オルトコロナウイルス亜科
出典: フリー百科事典『ウィキペディア（Wikipedia）』 (2023/11/03 03:01 UTC 版)
オルトコロナウイルス亜科（オルトコロナウイルスあか、Orthocoronavirinae / コロナウイルス〈Coronavirus〉）は、ゲノムとしてリボ核酸 (RNA) をもつ一本鎖プラス鎖RNAウイルスで、哺乳類や鳥類に病気を引き起こすウイルスのグループの1つ[1]。ニドウイルス目コロナウイルス科に属する[2][3]。
注釈
- ^ ただしこれらのウイルスは、単に病原菌として分離されたのみで、電子顕微鏡などで特徴づけられたわけではない。
- ^ ヒト腸コロナウイルス4408 - Human enteric coronavirus 4408 (HECV-4408)：については除外する。
出典
- ^ a b c d e f g h i j k 家畜・家禽のコロナウイルス病 国立研究開発法人 農業・食品産業技術総合研究機構 動物衛生研究部門 2003年4月14日
- ^ a b AMQ King, ed (2011). “Family Coronaviridae”. Ninth Report of the International Committee on Taxonomy of Viruses. Elsevier, Oxford. pp. 806-828. ISBN 978-0-12-384684-6
- ^ ICTV Master Species List 2009 - v10 (xls) - International Committee on Taxonomy of Viruses (24 August 2010)
- ^ “Homology-Based Identification of a Mutation in the Coronavirus RNA-Dependent RNA Polymerase That Confers Resistance to Multiple Mutagens”. Journal of Virology 90 (16): 7415-28. (August 2016). doi:10.1128/JVI.00080-16. PMC 4984655. PMID 27279608. "CoVs also have the largest known RNA virus genomes, ranging from 27 to 34 kb (31, 32), and increased fidelity in CoVs is likely required for the maintenance of these large genomes (14)."
- ^ a b c d e f g h 田口 2011.
- ^ Tyrell DA, Almeida JD, Berry DM. Cunningham CH, Hamre D, Hofstad MS, Mulluci L and McIntosh K. (1968) Coronaviruses. Nature (Lond.) 220: 650.
- ^ “Coronaviruses, a New Group of Animal RNA Viruses”. Avian Diseases 14 (2): 330-336. (1970). doi:10.2307/1588476. ISSN 0005-2086. JSTOR 1588476.
- ^ “Human coronaviruses: insights into environmental resistance and its influence on the development of new antiseptic strategies”. Viruses 4 (11): 3044-3068. (November 2012). doi:10.3390/v4113044. PMC 3509683. PMID 23202515.
- ^ “Recovery in tracheal organ cultures of novel viruses from patients with respiratory disease. - PMC”. 2022年5月16日閲覧。
- ^ “Virology: Coronaviruses”. Nature 220 (5168): 650–650. (1968/11/16). doi:10.1038/220650b0 2022年5月16日閲覧。.
- ^ Virus Taxonomy: 2019 ReleaseICTV
- ^ “Structure of SARS coronavirus spike receptor-binding domain complexed with receptor”. Science 309 (5742): 1864-1868. (September 2005). Bibcode: 2005Sci...309.1864L. doi:10.1126/science.1116480. PMID 16166518.
- ^ “A case for the ancient origin of coronaviruses”. Journal of Virology 87 (12): 7039-45. (June 2013). doi:10.1128/JVI.03273-1 2. PMC 3676139. PMID 23596293.
- ^ “Discovery of seven novel Mammalian and avian coronaviruses in the genus deltacoronavirus supports bat coronaviruses as the gene source of alphacoronavirus and betacoronavirus and avian coronaviruses as the gene source of gammacoronavirus and deltacoronavirus”. Journal of Virology 86 (7): 3995-4008. (April 2012). doi:10.1128/JVI.06540-11. PMC 3302495. PMID 22278237.
- ^ a b c “Molecular Evolution of Human Coronavirus Genomes”. Trends in Microbiology 25 (1): 35-48. (January 2017). doi:10.1016/j.tim.2016.09.001. PMC 7111218. PMID 27743750. "Specifically, all HCoVs are thought to have a bat origin, with the exception of lineage A beta-CoVs, which may have reservoirs in rodents [2]."
- ^ “Evidence supporting a zoonotic origin of human coronavirus strain NL63”. Journal of Virology 86 (23): 12816-25. (December 2012). doi:10.1128/JVI.00906-12. PMC 3497669. PMID 22993147. "If these predictions are correct, this observation suggests that HCoV-NL63 may have originated from bats between 1190 and 1449 CE."
- ^ “Distant relatives of severe acute respiratory syndrome coronavirus and close relatives of human coronavirus 229E in bats, Ghana”. Emerging Infectious Diseases 15 (9): 1377-84. (September 2009). doi:10.3201/eid1509.090224. PMC 2819850. PMID 19788804. "The most recent common ancestor of hCoV-229E and GhanaBt-CoVGrp1 existed in ≈1686-1800 AD."
- ^ “Identification and characterization of a novel alpaca respiratory coronavirus most closely related to the human coronavirus 229E”. Viruses 4 (12): 3689-700. (December 2012). doi:10.3390/v4123689. PMC 3528286. PMID 23235471.
- ^ “Molecular Evolution of Human Coronavirus Genomes”. Trends in Microbiology 25 (1): 35-48. (January 2017). doi:10.1016/j.tim.2016.09.001. PMC 7111218. PMID 27743750.
- ^ “Genetic characterization of Betacoronavirus lineage C viruses in bats reveals marked sequence divergence in the spike protein of pipistrellus bat coronavirus HKU5 in Japanese pipistrelle: implications for the origin of the novel Middle East respiratory syndrome coronavirus”. Journal of Virology 87 (15): 8638-50. (August 2013). doi:10.1128/JVI.01055-13. PMC 3719811. PMID 23720729.
- ^ “Evolutionary insights into the ecology of coronaviruses”. Journal of Virology 81 (8): 4012-20. (April 2007). doi:10.1128/jvi.02605-06. PMC 1866124. PMID 17267506.
- ^ “SARS-Coronavirus ancestor's foot-prints in South-East Asian bat colonies and the refuge theory”. Infection, Genetics and Evolution 11 (7): 1690-702. (October 2011). doi:10.1016/j.meegid.2011.06.021. PMC 7106191. PMID 21763784.
- ^ “Evolutionary relationships between bat coronaviruses and their hosts”. Emerging Infectious Diseases 13 (10): 1526-32. (October 2007). doi:10.3201/eid1310.070448. PMC 2851503. PMID 18258002.
- ^ “Discovery of a novel coronavirus, China Rattus coronavirus HKU24, from Norway rats supports the murine origin of Betacoronavirus 1 and has implications for the ancestor of Betacoronavirus lineage A”. Journal of Virology 89 (6): 3076-92. (March 2015). doi:10.1128/JVI.02420-14. PMC 4337523. PMID 25552712.
- ^ a b “Evolutionary dynamics of bovine coronaviruses: natural selection pattern of the spike gene implies adaptive evolution of the strains”. The Journal of General Virology 94 (Pt 9): 2036-2049. (September 2013). doi:10.1099/vir.0.054940-0. PMID 23804565. "See Table 1"
- ^ “Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event”. Journal of Virology 79 (3): 1595-604. (February 2005). doi:10.1128/jvi.79.3.1595-1604.2005. PMC 544107. PMID 15650185.
- ^ “Complete genomic sequence of human coronavirus OC43: molecular clock analysis suggests a relatively recent zoonotic coronavirus transmission event”. Journal of Virology 79 (3): 1595-604. (February 2005). doi:10.1128/JVI.79.3.1595-1604.2005. PMC 544107. PMID 15650185. "However, it is tempting to speculate about an alternative hypothesis, that the 1889-1890 pandemic may have been the result of interspecies transmission of bovine coronaviruses to humans, resulting in the subsequent emergence of HCoV-OC43."
- ^ “Hosts and Sources of Endemic Human Coronaviruses”. Advances in Virus Research 100: 163-188. (2018). doi:10.1016/bs.aivir.2018.01.001. ISBN 9780128152010. PMC 7112090. PMID 29551135.
- ^ “Molecular epidemiology of human coronavirus OC43 reveals evolution of different genotypes over time and recent emergence of a novel genotype due to natural recombination”. Journal of Virology 85 (21): 11325-37. (November 2011). doi:10.1128/JVI.05512-11. PMC 3194943. PMID 21849456.
- ^ “Mouse hepatitis virus infection of the CNS: a model for defense, disease, and repair”. Frontiers in Bioscience 13 (13): 4393-406. (May 2008). doi:10.2741/3012. PMC 5025298. PMID 18508518.
- ^ a b c d e f g h コロナウイルスとは 国立感染症研究所, Jan 10, 2020 Accessed: 2020-01-20
- ^ a b “中国･新型コロナ｢遺伝子情報｣封じ込めの衝撃”. 東洋経済オンライン (2020年3月5日). 2020年3月6日閲覧。
[続きの解説]
「オルトコロナウイルス亜科」の続きの解説一覧
- 1 オルトコロナウイルス亜科とは
- 2 オルトコロナウイルス亜科の概要
- 3 構造
- 4 増殖過程
- 5 進化過程
- 6 ヒトコロナウイルス
- 7 参考文献
- 8 外部リンク
- オルトコロナウイルス亜科のページへのリンク
