繊維状ファージ
出典: フリー百科事典『ウィキペディア（Wikipedia）』 (2023/02/22 14:38 UTC 版)
繊維状ファージ（せんいじょうファージ、英: filamentous bacteriophage）は、細菌に感染するウイルス（バクテリオファージ）の分類の1つ（イノウイルス科Inoviridae）である。名称はその繊維状の形状、すなわち調理したスパゲッティのような、細長く柔軟なワーム状の鎖構造であることに由来し、直径は約6 nm、長さは1000–2000 nmである[1][2][3][4][5]。ビリオンの外被は5種類のウイルスタンパク質から構成される。これらのタンパク質は宿主細菌の内膜での組み立て時に配置され、新たなビリオンが膜から突出するにつれて付加されてゆく。この科の持つ単純性は分子生物学の基本的側面の研究のモデルとして魅力的であり、免疫学やナノテクノロジーにおいて有用なツールである。
- ^ a b c “Filamentous phages: masters of a microbial sharing economy”. EMBO Reports 20 (6): e47427. (June 2019). doi:10.15252/embr.201847427. PMC 6549030. PMID 30952693.
- ^ a b c d e f g h “Filamentous Bacteriophage Proteins and Assembly”. Sub-Cellular Biochemistry (Springer Singapore) 88: 261–279. (2018). doi:10.1007/978-981-10-8456-0_12. ISBN 978-981-10-8455-3. PMID 29900501.
- ^ a b “Big things in small packages: the genetics of filamentous phage and effects on fitness of their host”. FEMS Microbiology Reviews 39 (4): 465–87. (July 2015). doi:10.1093/femsre/fuu007. PMID 25670735.
- ^ a b “Filamentous Phage: Structure and Biology”. Advances in Experimental Medicine and Biology (Springer International Publishing) 1053: 1–20. (2017). doi:10.1007/978-3-319-72077-7_1. ISBN 978-3-319-72076-0. PMID 29549632.
- ^ a b c d e “Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes”. Nature Microbiology 4 (11): 1895–1906. (November 2019). doi:10.1038/s41564-019-0510-x. PMC 6813254. PMID 31332386.
- ^ “Viral Zone”. ExPASy. 2015年6月15日閲覧。
- ^ a b “Virus Taxonomy: 2019 Release”. 2020年7月4日閲覧。
- ^ a b NCBI: Inovirus (genus)
- ^ a b ICTV: ICTV Taxonomy history: Inovirus. 2019 EC 51, Berlin, Germany, July 2019; Email ratification March 2020 (MSL #35).
- ^ a b “Molecular models and structural comparisons of native and mutant class I filamentous bacteriophages Ff (fd, f1, M13), If1 and IKe”. Journal of Molecular Biology 235 (1): 260–86. (January 1994). doi:10.1016/s0022-2836(05)80032-4. PMID 8289247.
- ^ a b c “Phage liquid crystalline droplets form occlusive sheaths that encapsulate and protect infectious rod-shaped bacteria”. Proceedings of the National Academy of Sciences of the United States of America 117 (9): 4724–4731. (March 2020). doi:10.1073/pnas.1917726117. PMC 7060675. PMID 32071243.
- ^ a b NCBI: Infulavirus (genus)
- ^ a b NCBI: Lineavirus (genus)
- ^ a b NCBI: Primolicivirus (genus)
- ^ a b NCBI: Tertilicivirus (genus)
- ^ a b NCBI: Thermus phage PH75 (species)
- ^ “Pf1 Inovirus. Electron density distribution calculated by a maximum entropy algorithm from native fibre diffraction data to 3 A resolution and single isomorphous replacement data to 5 A resolution”. Journal of Molecular Biology 193 (2): 315–43. (January 1987). doi:10.1016/0022-2836(87)90222-1. PMID 3599076.
- ^ a b “Complex of bacteriophage M13 single-stranded DNA and gene 5 protein”. Journal of Molecular Biology 82 (4): 425–39. (February 1974). doi:10.1016/0022-2836(74)90239-3. PMID 4594145.
- ^ “Three-dimensional structure of complexes of single-stranded DNA-binding proteins with DNA. IKe and fd gene 5 proteins form left-handed helices with single-stranded DNA”. Journal of Molecular Biology 208 (1): 57–64. (July 1989). doi:10.1016/0022-2836(89)90087-9. PMID 2671388.
- ^ a b “Release of male-specific bacteriophages from surviving host bacteria”. Virology 22 (3): 305–13. (March 1964). doi:10.1016/0042-6822(64)90021-2. PMID 14127828.
- ^ “Ff gene 5 single-stranded DNA-binding protein assembles on nucleotides constrained by a DNA hairpin”. Biochemistry 43 (9): 2622–34. (March 2004). doi:10.1021/bi030177g. PMID 14992600.
- ^ Rapoza, M. P.; Webster, R. E. (1995-05-05). “The products of gene I and the overlapping in-frame gene XI are required for filamentous phage assembly”. Journal of Molecular Biology 248 (3): 627–638. doi:10.1006/jmbi.1995.0247. ISSN 0022-2836. PMID 7752229.
- ^ Loh, Belinda; Haase, Maximilian; Mueller, Lukas; Kuhn, Andreas; Leptihn, Sebastian (04 09, 2017). “The Transmembrane Morphogenesis Protein gp1 of Filamentous Phages Contains Walker A and Walker B Motifs Essential for Phage Assembly”. Viruses 9 (4). doi:10.3390/v9040073. ISSN 1999-4915. PMC 5408679. PMID 28397779.
- ^ a b Loh, Belinda; Kuhn, Andreas; Leptihn, Sebastian (May 2019). “The fascinating biology behind phage display: filamentous phage assembly”. Molecular Microbiology 111 (5): 1132–1138. doi:10.1111/mmi.14187.
- ^ a b NCBI: Xanthomonas phage Cf1t (species)
- ^ “Multiple origins of prokaryotic and eukaryotic single-stranded DNA viruses from bacterial and archaeal plasmids”. Nature Communications 10 (1): 3425. (July 2019). doi:10.1038/s41467-019-11433-0. PMC 6668415. PMID 31366885.
- ^ International Committee on Taxonomy of Viruses Executive Committee (May 2020). “The new scope of virus taxonomy: partitioning the virosphere into 15 hierarchical ranks”. Nature Microbiology 5 (5): 668–674. doi:10.1038/s41564-020-0709-x. PMC 7186216. PMID 32341570.
- ^ Roux, Simon; Krupovic, Mart; Daly, Rebecca A.; Borges, Adair L.; Nayfach, Stephen; Schulz, Frederik; Sharrar, Allison; Matheus Carnevali, Paula B. et al. (11 2019). “Cryptic inoviruses revealed as pervasive in bacteria and archaea across Earth's biomes”. Nature Microbiology 4 (11): 1895–1906. doi:10.1038/s41564-019-0510-x. ISSN 2058-5276. PMC 6813254. PMID 31332386.
- ^ NCBI: Affertcholeramvirus (genus)
- ^ “Studies on the sonic degradation of deoxyribonucleic acid”. Biophysical Journal 2 (3): 235–47. (May 1962). Bibcode: 1962BpJ.....2..235F. doi:10.1016/S0006-3495(62)86852-0. PMC 1366369. PMID 13894963.
- ^ “Physical and Chemical Properties of Two New Small Bacteriophages”. Nature 197 (4866): 517–518. (1963). Bibcode: 1963Natur.197..517M. doi:10.1038/197517b0.
- ^ “Similarities and differences within members of the Ff family of filamentous bacteriophage viruses”. The Journal of Physical Chemistry B 115 (51): 15370–9. (December 2011). doi:10.1021/jp2079742. PMID 22085310.
- ^ “Conditional lethal mutants of the small filamentous coliphage M13. I. Isolation, complementation, cell killing, time of cistron action”. Virology 30 (3): 397–410. (November 1966). doi:10.1016/0042-6822(66)90118-8. PMID 5921643.
- ^ “Conditional lethal mutants of the small filamentous coliphage M13. II. Two genes for coat proteins”. Virology 39 (1): 42–53. (September 1969). doi:10.1016/0042-6822(69)90346-8. PMID 5807970.
- ^ “Genetic control of bacteriophage M13 DNA synthesis”. Journal of Molecular Biology 37 (1): 181–200. (October 1968). doi:10.1016/0022-2836(68)90082-X. PMID 4939035.
- ^ “The proteins of bacteriophage M13”. Proceedings of the National Academy of Sciences of the United States of America 62 (3): 800–7. (March 1969). doi:10.1073/pnas.62.3.800. PMC 223669. PMID 5257006.
- ^ “Isolation and characterization of gene 5 protein of filamentous bacterial viruses”. Journal of Molecular Biology 68 (1): 139–52. (July 1972). doi:10.1016/0022-2836(72)90269-0. PMID 4115107.
- ^ “Transposition of a DNA sequence determining kanamycin resistance into the single-stranded genome of bacteriophage fd”. Molecular & General Genetics 159 (2): 171–8. (February 1978). doi:10.1007/bf00270890. PMID 345091.
- ^ Sattar, Sadia; Bennett, Nicholas J.; Wen, Wesley X.; Guthrie, Jenness M.; Blackwell, Len F.; Conway, James F.; Rakonjac, Jasna (2015). “Ff-nano, short functionalized nanorods derived from Ff (f1, fd, or M13) filamentous bacteriophage”. Frontiers in Microbiology 6: 316. doi:10.3389/fmicb.2015.00316. ISSN 1664-302X. PMC 4403547. PMID 25941520.
- ^ “Regulation of filamentous bacteriophage length by modification of electrostatic interactions between coat protein and DNA”. Journal of Molecular Biology 217 (2): 223–7. (January 1991). doi:10.1016/0022-2836(91)90534-d. PMID 1992159.
- ^ “Nucleotide sequence of bacteriophage fd DNA”. Nucleic Acids Research 5 (12): 4495–503. (December 1978). doi:10.1093/nar/5.12.4495. PMC 342768. PMID 745987.
- ^ “The classification of viruses”. Annual Review of Microbiology 20 (1): 45–74. (1966). doi:10.1146/annurev.mi.20.100166.000401. PMID 5330240.
- ^ “Classification and nomenclature of viruses. Fourth report of the International Committee on Taxonomy of Viruses”. Intervirology 17 (1–3): 1–199. (1982). doi:10.1159/000149278. PMID 6811498.
- ^ Messing, Joachim (1991). “Cloning in M13 phage or how to use biology at its best” (英語). Gene 100: 3–12. doi:10.1016/0378-1119(91)90344-B. ISSN 0378-1119.
- ^ Messing, Joachim (1996). “Cloning Single-Stranded DNA”. Molecular Biotechnology 5: 39–47.
- ^ “What's in a virus name?”. Nature 209 (5022): 450–4. (January 1966). Bibcode: 1966Natur.209..450G. doi:10.1038/209450a0. PMID 5919575.
- ^ “Filamentous fusion phage: novel expression vectors that display cloned antigens on the virion surface”. Science 228 (4705): 1315–7. (June 1985). doi:10.1126/science.4001944. PMID 4001944.
- ^ “Filamentous bacteriophage fd as an antigen delivery system in vaccination”. International Journal of Molecular Sciences 13 (4): 5179–94. (2012-04-24). doi:10.3390/ijms13045179. PMC 3344273. PMID 22606037.
- ^ “Phage Display Libraries: From Binders to Targeted Drug Delivery and Human Therapeutics”. Molecular Biotechnology 61 (4): 286–303. (April 2019). doi:10.1007/s12033-019-00156-8. PMID 30729435.
- ^ a b “Beyond phage display: non-traditional applications of the filamentous bacteriophage as a vaccine carrier, therapeutic biologic, and bioconjugation scaffold”. Frontiers in Microbiology 6: 755. (2015). doi:10.3389/fmicb.2015.00755. PMC 4523942. PMID 26300850.
- ^ “Versatile de novo enzyme activity in capsid proteins from an engineered M13 bacteriophage library”. Journal of the American Chemical Society 136 (47): 16508–14. (November 2014). doi:10.1021/ja506346f. PMID 25343220.
- ^ “M13 virus-directed synthesis of nanostructured metal oxides for lithium-oxygen batteries”. Nano Letters 14 (8): 4837–45. (August 2014). doi:10.1021/nl502078m. PMID 25058851.
- ^ “Constructing Multifunctional Virus-Templated Nanoporous Composites for Thin Film Solar Cells: Contributions of Morphology and Optics to Photocurrent Generation”. The Journal of Physical Chemistry C 119 (25): 13987–4000. (June 2015). doi:10.1021/acs.jpcc.5b00295. hdl:1721.1/102981. ISSN 1932-7447.
- ^ “Filamentous Phages As a Model System in Soft Matter Physics”. Frontiers in Microbiology 7: 1013. (2016-06-30). doi:10.3389/fmicb.2016.01013. PMC 4927585. PMID 27446051.
- ^ “Pseudomonas aeruginosa biofilm matrix into a liquid crystal”. Microbial Cell 3 (1): 49–52. (December 2015). doi:10.15698/mic2016.01.475. PMC 5354590. PMID 28357315.
[続きの解説]
「繊維状ファージ」の続きの解説一覧
- 1 繊維状ファージとは
- 2 繊維状ファージの概要
- 3 歴史
- 4 外部リンク
- 繊維状ファージのページへのリンク
