エンハンサー
エンハンサー
出典: フリー百科事典『ウィキペディア(Wikipedia)』 (2024/03/26 13:50 UTC 版)
遺伝学においてエンハンサー(英: enhancer)は、特定の遺伝子の転写の可能性を高めるためにタンパク質(アクチベーター)が結合する、短い(50–1500塩基対)DNA領域である[1][2]。多くの場合、これらのエンハンサーに結合するタンパク質は転写因子と呼ばれる。エンハンサーはシスに作用し、遺伝子から最大で100万塩基対も離れている場合もあり、転写開始部位の上流に位置する場合も下流に位置する場合もある[2][3]。エンハンサーは原核生物と真核生物の双方に存在し[4]、ヒトのゲノム中には数十万個のエンハンサーが存在する[2]。
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- ^ a b “Three-dimensional genome restructuring across timescales of activity-induced neuronal gene expression”. Nat Neurosci 23 (6): 707–717. (June 2020). doi:10.1038/s41593-020-0634-6. PMC 7558717. PMID 32451484 .
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- ^ “The degree of enhancer or promoter activity is reflected by the levels and directionality of eRNA transcription”. Genes Dev 32 (1): 42–57. (January 2018). doi:10.1101/gad.308619.117. PMC 5828394. PMID 29378788 .
- ^ “MAP kinase phosphorylation-dependent activation of Elk-1 leads to activation of the co-activator p300”. EMBO J 22 (2): 281–91. (January 2003). doi:10.1093/emboj/cdg028. PMC 140103. PMID 12514134 .
- ^ “Enhancer RNAs predict enhancer-gene regulatory links and are critical for enhancer function in neuronal systems”. Nucleic Acids Res 48 (17): 9550–9570. (September 2020). doi:10.1093/nar/gkaa671. PMC 7515708. PMID 32810208 .
- ^ Arnosti, David N.; Kulkarni, Meghana M. (2005-04-01). “Transcriptional enhancers: Intelligent enhanceosomes or flexible billboards?”. Journal of Cellular Biochemistry 94 (5): 890–898. doi:10.1002/jcb.20352. ISSN 0730-2312. PMID 15696541 .
- ^ “Regulation of eukaryotic gene expression by the untranslated gene regions and other non-coding elements”. Cellular and Molecular Life Sciences 69 (21): 3613–34. (November 2012). doi:10.1007/s00018-012-0990-9. PMC 3474909. PMID 22538991 .
- ^ “Studying Drosophila embryogenesis with P-lacZ enhancer trap lines”. Roux's Archives of Developmental Biology 201 (4): 194–220. (June 1992). doi:10.1007/BF00188752. PMID 28305845.
- ^ “CATaDa reveals global remodelling of chromatin accessibility during stem cell differentiation in vivo”. eLife 7. (February 2018). doi:10.7554/eLife.32341. PMC 5826290. PMID 29481322 .
- ^ “Identifying transcriptional cis-regulatory modules in animal genomes”. Wiley Interdisciplinary Reviews: Developmental Biology 4 (2): 59–84. (2014). doi:10.1002/wdev.168. PMC 4339228. PMID 25704908 .
- ^ a b “Enhancer identification through comparative genomics”. Seminars in Cell & Developmental Biology 18 (1): 140–52. (February 2007). doi:10.1016/j.semcdb.2006.12.014. PMC 1855162. PMID 17276707 .
- ^ Kazemian, Majid; Suryamohan, Kushal; Chen, Jia-Yu; Zhang, Yinan; Samee, Md Abul Hassan; Halfon, Marc S.; Sinha, Saurabh (2014-09). “Evidence for deep regulatory similarities in early developmental programs across highly diverged insects”. Genome Biology and Evolution 6 (9): 2301–2320. doi:10.1093/gbe/evu184. ISSN 1759-6653. PMC 4217690. PMID 25173756 .
- ^ “Dissecting the regulatory switches of development: lessons from enhancer evolution in Drosophila”. Development 137 (1): 5–13. (January 2010). doi:10.1242/dev.036160. PMC 2796927. PMID 20023155 .
- ^ “Asymmetric and node-specific nodal expression patterns are controlled by two distinct cis-acting regulatory elements”. Genes & Development 13 (12): 1575–88. (June 1999). doi:10.1101/gad.13.12.1575. PMC 316799. PMID 10385626 .
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- ^ “The Foxh1-dependent autoregulatory enhancer controls the level of Nodal signals in the mouse embryo”. Development 129 (14): 3455–68. (July 2002). PMID 12091315.
- ^ “Direct transcriptional regulation of Gata4 during early endoderm specification is controlled by FoxA2 binding to an intronic enhancer”. Developmental Biology 346 (2): 346–55. (October 2010). doi:10.1016/j.ydbio.2010.07.032. PMC 2945415. PMID 20692247 .
- ^ “Shadow enhancers foster robustness of Drosophila gastrulation”. Current Biology 20 (17): 1562–7. (September 2010). doi:10.1016/j.cub.2010.07.043. PMC 4257487. PMID 20797865 .
- ^ “Adaptive evolution of pelvic reduction in sticklebacks by recurrent deletion of a Pitx1 enhancer”. Science 327 (5963): 302–5. (January 2010). doi:10.1126/science.1182213. PMC 3109066. PMID 20007865 .
- ^ “Generation of a novel wing colour pattern by the Wingless morphogen”. Nature 464 (7292): 1143–8. (April 2010). doi:10.1038/nature08896. PMID 20376004.
- ^ “Master transcription factors and mediator establish super-enhancers at key cell identity genes”. Cell 153 (2): 307–19. (April 2013). doi:10.1016/j.cell.2013.03.035. PMC 3653129. PMID 23582322 .
- ^ “Chromatin stretch enhancer states drive cell-specific gene regulation and harbor human disease risk variants”. Proceedings of the National Academy of Sciences of the United States of America 110 (44): 17921–6. (October 2013). doi:10.1073/pnas.1317023110. PMC 3816444. PMID 24127591 .
- ^ “NF-κB directs dynamic super enhancer formation in inflammation and atherogenesis”. Molecular Cell 56 (2): 219–231. (October 2014). doi:10.1016/j.molcel.2014.08.024. PMC 4224636. PMID 25263595 .
- ^ “Acute TNF-induced repression of cell identity genes is mediated by NFκB-directed redistribution of cofactors from super-enhancers”. Genome Research 25 (9): 1281–94. (September 2015). doi:10.1101/gr.188300.114. PMC 4561488. PMID 26113076 .
- ^ “Late-phase synthesis of IκBα insulates the TLR4-activated canonical NF-κB pathway from noncanonical NF-κB signaling in macrophages”. Science Signaling 9 (457): ra120. (December 2016). doi:10.1126/scisignal.aaf1129. PMC 5260935. PMID 27923915 .
- ^ “Super-enhancers delineate disease-associated regulatory nodes in T cells”. Nature 520 (7548): 558–62. (April 2015). doi:10.1038/nature14154. PMC 4409450. PMID 25686607 .
- ^ “Dynamic aberrant NF-κB spurs tumorigenesis: a new model encompassing the microenvironment”. Cytokine & Growth Factor Reviews 26 (4): 389–403. (August 2015). doi:10.1016/j.cytogfr.2015.06.001. PMC 4526340. PMID 26119834 .
- ^ “Brd4 maintains constitutively active NF-κB in cancer cells by binding to acetylated RelA”. Oncogene 33 (18): 2395–404. (May 2014). doi:10.1038/onc.2013.179. PMC 3913736. PMID 23686307 .
- 1 エンハンサーとは
- 2 エンハンサーの概要
- 3 発生生物学において
- 4 発生機構の進化
- 5 脚注
- エンハンサーのページへのリンク