Condensin-mediated remodeling of the mitotic chromatin landscape in fission yeast

Nat Genet. 2017 Oct;49(10):1553-1557. doi: 10.1038/ng.3938. Epub 2017 Aug 21.

Abstract

The eukaryotic genome consists of DNA molecules far longer than the cells that contain them. They reach their greatest compaction during chromosome condensation in mitosis. This process is aided by condensin, a structural maintenance of chromosomes (SMC) family member. The spatial organization of mitotic chromosomes and how condensin shapes chromatin architecture are not yet fully understood. Here we use chromosome conformation capture (Hi-C) to study mitotic chromosome condensation in the fission yeast Schizosaccharomyces pombe. This showed that the interphase landscape characterized by small chromatin domains is replaced by fewer but larger domains in mitosis. Condensin achieves this by setting up longer-range, intrachromosomal DNA interactions, which compact and individualize chromosomes. At the same time, local chromatin contacts are constrained by condensin, with profound implications for local chromatin function during mitosis. Our results highlight condensin as a major determinant that changes the chromatin landscape as cells prepare their genomes for cell division.

MeSH terms

  • Adenosine Triphosphatases / genetics
  • Adenosine Triphosphatases / physiology*
  • Base Sequence
  • Chromatin / ultrastructure
  • Chromatin Assembly and Disassembly / genetics
  • Chromatin Assembly and Disassembly / physiology*
  • Chromatin Immunoprecipitation
  • Chromosomes, Fungal / ultrastructure*
  • DNA, Fungal / genetics
  • DNA-Binding Proteins / genetics
  • DNA-Binding Proteins / physiology*
  • Deoxyribonucleases, Type II Site-Specific
  • Interphase
  • Mitosis
  • Multiprotein Complexes / genetics
  • Multiprotein Complexes / physiology*
  • Schizosaccharomyces / genetics*
  • Schizosaccharomyces / ultrastructure
  • Schizosaccharomyces pombe Proteins / genetics
  • Schizosaccharomyces pombe Proteins / physiology*

Substances

  • Chromatin
  • DNA, Fungal
  • DNA-Binding Proteins
  • Multiprotein Complexes
  • Schizosaccharomyces pombe Proteins
  • condensin complexes
  • Deoxyribonucleases, Type II Site-Specific
  • GATC-specific type II deoxyribonucleases
  • Adenosine Triphosphatases